What do the colours on the pathway heatmaps represent? - FastBMD
The pathway heatmap is an appealing visualization to clearly shows how the expression of each pathway gene compares to the others. It is generated when you click a pathway or gene set name in the “Gene Set Enrichment” panel at the result page. An example output is shown below The pathway heatmap values are calculated through a series of steps: The fitted model for each gene is evaluated across the range of doses in the uploaded data. The resulting modeled expression values are normalized
Help Online - Tutorials - Create Heatmap with Virtual Matrix and
Let's Plot 6: Simple guide to heatmaps with ComplexHeatmaps
Make heatmaps in R with pheatmap - Kamil Slowikowski
Heat map of changed pathways after 24 and 48 h of fasting in
Figure S5 -Heatmap of functional categories that are
r - Ploting FDR along with the pathway as heatmap any simple way
Dose-response metabolomics and pathway sensitivity to map
Nextcast: A software suite to analyse and model toxicogenomics
Fold-change heat-map representing central metabolic pathways and
Effects of low doses of methylmercury (MeHg) exposure on
Help Online - Tutorials - Create Heatmap with Virtual Matrix and
Let's Plot 6: Simple guide to heatmaps with ComplexHeatmaps
How to choose colors for maps and heat maps - The DO Loop